function Calculate(form) {
var windsize = form.windsize.value //parseInt(form.windsize.value)
thePept = new Pept(form.PeptBox.value);
form.PeptBox.value = thePept.Sequence;
form.mwBox.value = thePept.MW();
form.ExCoBox.value = thePept.ExCo();
form.lBox.value = thePept.Sequence.length;
form.VolBox.value = thePept.Vol(form.mwBox.value);
document.ProtCalc.threeletterbox.value=thePept.ConvertCode(form.PeptBox.value);
document.ProtCalc.hydrobox.value=thePept.Hydro(windsize,form.PeptBox.value);
document.ProtCalc.resnumbox.value=thePept.ResNum(windsize,form.PeptBox.value);
document.ProtCalc.items.value=MakeItemsList(windsize,form.PeptBox.value);
}
function MakeHydrograph() {
if (document.ProtCalc.hydrobox.value.length>parseInt(document.ProtCalc.windsize.value)/2){
var graphWindow=window.open("","Hydrograph","menubar=no,scrollbars=no,status=no,width=400,height=270")
graphWindow.document.writeln("Hydropathy Graph");
graphWindow.document.writeln('');
graphWindow.document.writeln('');
graphWindow.document.close(graphWindow);
}
else{
window.alert("The length of the peptide must be at least twice the window size to graph properly")
}
}
function Blast(){
var graphwindow=window.open("","BLAST");
graphwindow.document.writeln("");
graphwindow.document.writeln('');
graphwindow.document.writeln("\